VIRTIGATION

Viral genome sequencing
and monitor virus outbreaks

Objectives

The main aim of this research focus is to develop new methods for high-throughput sequencing of full viral genome and virus sequence analysis web platforms, that can be instrumental to better characterize natural resistance mechanisms, identify emerging and fast spreading virus threats, and design isolates for cross-protection. Specifically, VIRTIGATION seeks to develop new tools for the large-scale analysis and monitoring of plant virus outbreaks and their transmission routes between European countries.

The specific objectives of the viral genome sequencing and monitoring of virus outbreaks component are to:
• Facilitate the standardization of full genome sequencing procedures;
• Link virus diversity to entry and transmission
• Monitor virus diversity and evolution in the EU
• Risk assessment of possible disease outbreaks
• Assessment of virus control methods

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